C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309755 KLHL3-001 ENSG00000146021 9606 - 5:137617500-137736090 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverOvaryPlacentaTestisENST00000309755
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Ovary Placenta Testis
ENST00000309755 0.812±0.00 1.274±0.00 1.373±0.45 0.500±0.00 0.141±0.06 1.931±0.43 0.288±0.00 0.404±0.17 0.117±0.01 0.900±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P1 CIL_0005P1_0001 CGP 5:136975298-137736090
CIL_0005OY CIL_0005OY_0001 CGP 5:137617500-137754376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 TAS structural molecule activity
GO:0005515 IPI:IEA protein binding
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0016567 TAS protein ubiquitination
GO:0031463 TAS Cul3-RING ubiquitin ligase complex
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0050801 IMP ion homeostasis
GO:0070294 IMP renal sodium ion absorption
GO:0070936 IDA protein K48-linked ubiquitination
GO:0072156 IMP distal tubule morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160860 Klhl3-001 protein_coding Mus_musculus 0 2446
ENSMUST00000091583 Klhl3-201 protein_coding Mus_musculus 0 2100

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