C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF2 and NCK interacting kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160934 Tnik-003 ENSMUSG00000027692 10090 + 3:28263214-28670585 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160934
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160934 0.647±0.36 0.537±0.08 2.799±0.62 10.376±3.48 0.365±0.00 0.613±0.12 0.494±0.09 0.105±0.03 0.340±0.19 0.636±0.17 1.340±0.43 1.133±1.07 0.605±0.19 1.324±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0002 CGP 3:27938695-28675858
CIL_0007SJ CIL_0007SJ_0002 VISTA 3:28120093-28722161
CIL_00080K CIL_00080K_0002 VISTA 3:28128875-28733466
CIL_0008FL CIL_0008FL_0002 VISTA 3:28138282-28741962
CIL_000710 CIL_000710_0002 CGP 3:28263214-28728356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0048471 ISO perinuclear region of cytoplasm
GO:0055037 ISO recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284483 TNIK-004 protein_coding Homo_sapiens 0 3542
ENST00000341852 TNIK-003 protein_coding Homo_sapiens 0 3446
ENST00000357327 TNIK-006 protein_coding Homo_sapiens 0 4338
ENST00000436636 TNIK-001 protein_coding Homo_sapiens 0 3952
ENST00000459881 TNIK-017 retained_intron Homo_sapiens 0 568
ENST00000460047 TNIK-007 protein_coding Homo_sapiens 0 3062
ENST00000464785 TNIK-016 processed_transcript Homo_sapiens 0 414
ENST00000465393 TNIK-002 protein_coding Homo_sapiens 0 597
ENST00000468757 TNIK-012 protein_coding Homo_sapiens 0 671
ENST00000470834 TNIK-009 protein_coding Homo_sapiens 0 4444
ENST00000475336 TNIK-005 protein_coding Homo_sapiens 0 3062
ENST00000484051 TNIK-011 retained_intron Homo_sapiens 0 917
ENST00000487846 TNIK-015 retained_intron Homo_sapiens 0 573
ENST00000488470 TNIK-008 protein_coding Homo_sapiens 0 2957
ENST00000496492 TNIK-010 retained_intron Homo_sapiens 0 2782

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