C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 3, homolog of Drosophila E(spl)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161207 Tle3-006 ENSMUSG00000032280 10090 + 9:61373514-61416976 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161207 10.627±2.29 22.764±3.12 7.735±0.00 16.345±0.23 17.576±4.50 15.721±0.82 2.371±1.04 9.377±1.25 2.221±0.72 10.034±2.96 0.927±0.00 17.911±1.84 11.558±1.49 34.741±3.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V4 CIL_0008V4_0002 VISTA 9:61070058-61671069
CIL_0009BU CIL_0009BU_0002 VISTA 9:61300844-61903666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100632 gro2-202 protein_coding Danio_rerio 0 1301
ENSDART00000100633 gro2-203 protein_coding Danio_rerio 0 346
ENSDART00000025018 gro2-201 protein_coding Danio_rerio 0 346
ENSDART00000045679 gro2-001 protein_coding Danio_rerio 0 346
ENST00000317509 TLE3-004 protein_coding Homo_sapiens 0 3022
ENST00000376472 TLE1-201 protein_coding Homo_sapiens 0 894
ENST00000376499 TLE1-001 protein_coding Homo_sapiens 0 894
ENST00000440567 TLE3-010 protein_coding Homo_sapiens 0 3253
ENST00000451782 TLE3-030 protein_coding Homo_sapiens 0 3118
ENST00000539550 TLE3-022 protein_coding Homo_sapiens 0 2381
ENST00000542329 TLE3-028 retained_intron Homo_sapiens 0 797
ENST00000557815 TLE3-023 retained_intron Homo_sapiens 0 351
ENST00000557907 TLE3-015 protein_coding Homo_sapiens 0 3020
ENST00000557919 TLE3-017 nonsense_mediated_decay Homo_sapiens 0 3070
ENST00000557984 TLE3-026 protein_coding Homo_sapiens 0 399
ENST00000557997 TLE3-016 protein_coding Homo_sapiens 0 3077
ENST00000558201 TLE3-011 protein_coding Homo_sapiens 0 3133
ENST00000558379 TLE3-008 protein_coding Homo_sapiens 0 2979
ENST00000558939 TLE3-001 protein_coding Homo_sapiens 0 3133
ENST00000559048 TLE3-007 protein_coding Homo_sapiens 0 3022
ENST00000559191 TLE3-009 protein_coding Homo_sapiens 0 1506
ENST00000559608 TLE3-029 retained_intron Homo_sapiens 0 348
ENST00000559826 TLE3-005 retained_intron Homo_sapiens 0 385
ENST00000559929 TLE3-013 protein_coding Homo_sapiens 0 2588
ENST00000560525 TLE3-019 nonsense_mediated_decay Homo_sapiens 0 3142
ENST00000560589 TLE3-012 protein_coding Homo_sapiens 0 2972
ENST00000560939 TLE3-020 protein_coding Homo_sapiens 0 3160
ENST00000560996 TLE3-014 protein_coding Homo_sapiens 0 545
ENST00000561453 TLE3-002 nonsense_mediated_decay Homo_sapiens 0 3029

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