C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thromboxane A synthase 1, platelet
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161360 Tbxas1-005 ENSMUSG00000029925 10090 + 6:38983310-39073206 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverMuscleTestisENSMUST00000161360
Transcript ID Adrenal Brain Colon Heart Liver Muscle Testis
ENSMUST00000161360 0.325±0.00 0.058±0.00 0.266±0.00 0.110±0.00 0.049±0.00 0.045±0.01 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0002 CGP 6:38663069-38876165
CIL_00023M CIL_00023M_0003 CGP 6:38694390-39084585
CIL_000309 CIL_000309_0003 CGP 6:38875404-39118349

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263552 TBXAS1-201 protein_coding Homo_sapiens 0 758
ENST00000336425 TBXAS1-001 protein_coding Homo_sapiens 0 758
ENST00000411653 TBXAS1-005 protein_coding Homo_sapiens 0 758
ENST00000414508 TBXAS1-202 protein_coding Homo_sapiens 0 758
ENST00000416849 TBXAS1-203 protein_coding Homo_sapiens 0 658
ENST00000422328 TBXAS1-006 nonsense_mediated_decay Homo_sapiens 0 758
ENST00000425687 TBXAS1-002 protein_coding Homo_sapiens 0 758
ENST00000448866 TBXAS1-003 protein_coding Homo_sapiens 0 758
ENST00000458722 TBXAS1-004 protein_coding Homo_sapiens 0 658
ENST00000462275 TBXAS1-007 processed_transcript Homo_sapiens 0 758
ENST00000469630 TBXAS1-015 retained_intron Homo_sapiens 0 497

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