C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor-like 5 (basic helix-loop-helix)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161425 Tcfl5-003 ENSMUSG00000038932 10090 - 2:180635254-180642589 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyMuscleOvaryPlacentaTestisENSMUST00000161425
Transcript ID Adrenal Heart Kidney Muscle Ovary Placenta Testis
ENSMUST00000161425 0.074±0.00 0.060±0.00 0.040±0.00 0.062±0.03 0.331±0.00 3.511±0.49 456.286±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O6 CIL_0001O6_0002 CGP 2:180589245-180622189
CIL_0001O1 CIL_0001O1_0002 CGP 2:180597790-180642708
CIL_0001O0 CIL_0001O0_0002 CGP 2:180621956-180709999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001673 IDA male germ cell nucleus
GO:0003677 IDA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217162 TCFL5-201 protein_coding Homo_sapiens 0 651
ENST00000335351 TCFL5-001 protein_coding Homo_sapiens 0 651

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