C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor-like 5 (basic helix-loop-helix)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217162 TCFL5-201 ENSG00000101190 9606 - 20:62845138-62861763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungPlacentaENST00000217162
Transcript ID Colon Heart Kidney Liver Lung Placenta
ENST00000217162 0.420±0.00 0.738±0.00 1.048±0.00 0.444±0.00 0.571±0.00 3.642±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O6 CIL_0001O6_0001 CGP 20:62804835-62841159
CIL_0001O1 CIL_0001O1_0001 CGP 20:62816244-62861763
CIL_0001O0 CIL_0001O0_0001 CGP 20:62841115-62937952

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037877 Tcfl5-001 protein_coding Mus_musculus 0 1519
ENSMUST00000131881 Tcfl5-002 retained_intron Mus_musculus 0 979
ENSMUST00000161425 Tcfl5-003 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000067955 Dph3-001 protein_coding Mus_musculus 0 279
ENSMUST00000022461 Dph3-002 protein_coding Mus_musculus 0 278
ENSMUST00000076359 Dph3b-ps-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000112000 Dph3-004 protein_coding Mus_musculus 0 222
ENSMUST00000144149 Dph3-006 retained_intron Mus_musculus 7e-33 147
ENSMUST00000167796 Dph3-007 processed_transcript Mus_musculus 7e-33 147
ENSMUST00000112001 Dph3-003 nonsense_mediated_decay Mus_musculus 7e-33 147
ENSMUST00000124303 Dph3-005 protein_coding Mus_musculus 3e-31 141
ENSMUST00000171598 Oxnad1-006 protein_coding Mus_musculus 1e-30 139
ENSMUST00000166810 Oxnad1-011 protein_coding Mus_musculus 1e-30 139
ENSMUST00000022462 Oxnad1-001 protein_coding Mus_musculus 2e-28 132
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 58

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