C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16585
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161442 Gm16585-001 ENSMUSG00000089657 10090 + 1:177786856-177787465 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000161442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000161442 0.118±0.06 0.162±0.00 0.235±0.00 0.291±0.15 0.392±0.21 0.577±0.00 0.225±0.08 0.621±0.15 0.143±0.08 0.566±0.25 0.601±0.31 0.180±0.00 0.482±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TT CIL_0006TT_0002 CGP 1:177729814-177796511

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372214 RP11-571F15.3-001 processed_pseudogene Homo_sapiens 0 453
ENST00000415328 RP11-229A12.2-001 processed_pseudogene Homo_sapiens 0 492
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 2e-38 163
ENST00000460876 RP11-2F9.3-001 processed_pseudogene Homo_sapiens 0 584
ENST00000462935 RPS8P3-001 processed_pseudogene Homo_sapiens 0 508
ENST00000481419 AC006539.2-001 processed_pseudogene Homo_sapiens 1e-23 113
ENST00000484005 RP11-252I14.1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000492328 ZNF90-004 processed_transcript Homo_sapiens 2e-23 113

Loading