C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S8 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426177 RPS8P6-001 ENSG00000231660 9606 - 3:308714-309322 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000426177
Transcript ID Brain
ENST00000426177 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050I CIL_00050I_0001 CGP 3:196596-1404217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140687 Gm15501-001 transcribed_processed_pseudogene Mus_musculus 0 241
ENSMUST00000133910 Gm15501-002 processed_transcript Mus_musculus 0 241
ENSMUST00000102696 Rps8-001 protein_coding Mus_musculus 0 241
ENSMUST00000118709 Rps8-ps2-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000121572 Gm14438-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000122418 Gm14323-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000180940 Gm11353-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000120833 Gm14414-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000092523 Gm10712-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000186115 RP23-393D20.3-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000118252 Gm5687-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000189312 RP24-160J12.4-001 processed_pseudogene Mus_musculus 5.99756e-43 178
ENSMUST00000137423 Rps8-005 retained_intron Mus_musculus 8.00001e-42 174
ENSMUST00000085711 Gm5121-201 processed_pseudogene Mus_musculus 3.00004e-41 172
ENSMUST00000161442 Gm16585-001 processed_pseudogene Mus_musculus 2e-38 163
ENSMUST00000121011 Rps8-ps3-001 processed_pseudogene Mus_musculus 3e-36 156
ENSMUST00000191349 RP24-160E3.1-001 processed_pseudogene Mus_musculus 3e-31 139
ENSMUST00000172445 Rps8-ps1-201 processed_pseudogene Mus_musculus 1e-30 137
ENSMUST00000127037 Rps8-004 retained_intron Mus_musculus 8e-22 108
ENSMUST00000140226 Rps8-002 retained_intron Mus_musculus 0.00000000003 73

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