C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415328 RP11-229A12.2-001 ENSG00000237186 9606 - 3:57530345-57530967 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryTestisENST00000415328
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000415328 0.023±0.00 0.072±0.00 0.048±0.00 0.135±0.00 0.024±0.00 0.043±0.00 0.454±0.22 0.063±0.00 0.105±0.00 0.141±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102696 Rps8-001 protein_coding Mus_musculus 0 562
ENSMUST00000140687 Gm15501-001 transcribed_processed_pseudogene Mus_musculus 0 551
ENSMUST00000133910 Gm15501-002 processed_transcript Mus_musculus 0 551
ENSMUST00000085711 Gm5121-201 processed_pseudogene Mus_musculus 0 551
ENSMUST00000118709 Rps8-ps2-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000121572 Gm14438-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000180940 Gm11353-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000122418 Gm14323-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000120833 Gm14414-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000186115 RP23-393D20.3-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000092523 Gm10712-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000161442 Gm16585-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000172445 Rps8-ps1-201 processed_pseudogene Mus_musculus 0 392
ENSMUST00000117183 Gm14427-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000189312 RP24-160J12.4-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000137423 Rps8-005 retained_intron Mus_musculus 0 259
ENSMUST00000191349 RP24-160E3.1-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000127037 Rps8-004 retained_intron Mus_musculus 0 231
ENSMUST00000140226 Rps8-002 retained_intron Mus_musculus 0.000000003 68
ENSMUST00000121011 Rps8-ps3-001 processed_pseudogene Mus_musculus 0 296

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