C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 79
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161520 Ccdc79-003 ENSMUSG00000052616 10090 - 8:104447037-104509883 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLiverMusclePlacentaENSMUST00000161520
Transcript ID Bladder Heart Kidney Liver Muscle Placenta
ENSMUST00000161520 0.045±0.00 0.012±0.00 0.024±0.01 0.034±0.01 0.015±0.01 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IU CIL_0004IU_0002 CGP 8:104417674-104509910
CIL_0004IV CIL_0004IV_0002 CGP 8:104446719-104534637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313294 CCDC79-001 nonsense_mediated_decay Homo_sapiens 0 1079
ENST00000433154 CCDC79-201 protein_coding Homo_sapiens 0 1079
ENST00000558713 CCDC79-003 protein_coding Homo_sapiens 0 1075
ENST00000559050 CCDC79-005 protein_coding Homo_sapiens 0 392
ENST00000561333 CCDC79-004 processed_transcript Homo_sapiens 0 1075

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