C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 79
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561333 CCDC79-004 ENSG00000249961 9606 - 16:66767428-66801026 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000561333
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000561333 0.020±0.00 0.143±0.00 0.069±0.00 0.025±0.01 0.031±0.00 0.055±0.00 0.044±0.00 0.039±0.00 0.017±0.00 0.009±0.00 0.020±0.00 0.946±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0004IU CIL_0004IU_0001 CGP 16:66720893-66801620
CIL_0004IV CIL_0004IV_0001 CGP 16:66754976-66873256

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064576 Ccdc79-001 protein_coding Mus_musculus 0 1415
ENSMUST00000162014 Ccdc79-002 protein_coding Mus_musculus 0 1253
ENSMUST00000159713 Ccdc79-004 nonsense_mediated_decay Mus_musculus 0 1077
ENSMUST00000161520 Ccdc79-003 nonsense_mediated_decay Mus_musculus 0 1075

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