C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 79
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052616 Ccdc79 10090 - 8:104446719-104509910 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064576 Ccdc79-001 104446719-104509887 protein_coding
  ENSMUST00000159713 Ccdc79-004 104447038-104509882 nonsense_mediated_decay
  ENSMUST00000161520 Ccdc79-003 104447037-104509883 nonsense_mediated_decay
  ENSMUST00000162014 Ccdc79-002 104447762-104509910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064576ENSMUST00000159713ENSMUST00000161520ENSMUST00000162014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064576 N/A N/A N/A N/A N/A 0.090±0.02 N/A 0.019±0.00 0.012±0.00 0.055±0.00 N/A 0.213±0.20 0.029±0.00 1.114±0.37
ENSMUST00000159713 0.020±0.00 0.072±0.03 N/A N/A 0.233±0.01 0.040±0.00 0.016±0.00 0.061±0.03 N/A 0.059±0.01 0.014±0.00 0.199±0.12 0.078±0.05 1.468±0.25
ENSMUST00000161520 N/A N/A 0.045±0.00 N/A N/A N/A 0.012±0.00 0.024±0.01 0.034±0.01 N/A 0.015±0.01 N/A 0.044±0.00 N/A
ENSMUST00000162014 0.015±0.00 N/A N/A 0.030±0.00 0.086±0.06 0.085±0.00 N/A 0.078±0.00 0.012±0.00 0.163±0.00 0.010±0.00 0.148±0.07 0.153±0.09 3.580±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IU CIL_0004IU_0002 CGP 8:104417674-104509910
CIL_0004IV CIL_0004IV_0002 CGP 8:104446719-104534637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000781 IDA chromosome, telomeric region
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0007129 IMP synapsis
GO:0045141 IMP meiotic telomere clustering

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058587 ccdc79 coiled-coil domain containing 79 protein_coding Danio_rerio
ENSG00000249961 CCDC79 coiled-coil domain containing 79 protein_coding Homo_sapiens

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