C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thromboxane A synthase 1, platelet
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161781 Tbxas1-002 ENSMUSG00000029925 10090 + 6:38919024-39084585 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161781
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161781 0.880±0.26 0.447±0.08 0.534±0.23 0.081±0.00 0.921±0.21 0.339±0.15 0.175±0.05 1.158±0.11 0.444±0.47 0.637±0.14 0.064±0.02 0.333±0.10 0.061±0.03 0.034±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0002 CGP 6:38663069-38876165
CIL_00023M CIL_00023M_0003 CGP 6:38694390-39084585
CIL_000309 CIL_000309_0003 CGP 6:38875404-39118349

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263552 TBXAS1-201 protein_coding Homo_sapiens 0 1301
ENST00000336425 TBXAS1-001 protein_coding Homo_sapiens 0 1301
ENST00000411653 TBXAS1-005 protein_coding Homo_sapiens 0 1303
ENST00000414041 TBXAS1-013 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000414508 TBXAS1-202 protein_coding Homo_sapiens 0 1303
ENST00000416849 TBXAS1-203 protein_coding Homo_sapiens 0 800
ENST00000422328 TBXAS1-006 nonsense_mediated_decay Homo_sapiens 0 1029
ENST00000425687 TBXAS1-002 protein_coding Homo_sapiens 0 1192
ENST00000438104 TBXAS1-011 protein_coding Homo_sapiens 0 507
ENST00000448866 TBXAS1-003 protein_coding Homo_sapiens 0 1301
ENST00000455353 TBXAS1-008 protein_coding Homo_sapiens 0 409
ENST00000458722 TBXAS1-004 protein_coding Homo_sapiens 0 800
ENST00000462275 TBXAS1-007 processed_transcript Homo_sapiens 0 1031
ENST00000469630 TBXAS1-015 retained_intron Homo_sapiens 0 497
ENST00000476637 TBXAS1-014 retained_intron Homo_sapiens 0 274
ENST00000492560 TBXAS1-012 retained_intron Homo_sapiens 0 278

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