C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Hermansky-Pudlak syndrome 1 homolog (human) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000162061  |
Hps1-005 |
ENSMUSG00000025188 |
10090 | - |
19:42758480-42778263  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00054X | CIL_00054X_0002 | CGP | 19:42725858-42779978 |
| CIL_00054W | CIL_00054W_0002 | CGP | 19:42755105-43388311 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006996 | IMP | organelle organization |
| GO:0007596 | IMP | blood coagulation |
| GO:0016023 | ISO | cytoplasmic membrane-bounded vesicle |
| GO:0030318 | IMP | melanocyte differentiation |
| GO:0032816 | IMP | positive regulation of natural killer cell activation |
| GO:0033299 | IMP | secretion of lysosomal enzymes |
| GO:0043473 | IMP | pigmentation |
| GO:0048069 | IMP | eye pigmentation |
| GO:0060041 | IMP | retina development in camera-type eye |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000325103
|
HPS1-009 | protein_coding | Homo_sapiens | 0 | 1546 |
|
ENST00000338546
|
HPS1-010 | protein_coding | Homo_sapiens | 0 | 809 |
|
ENST00000359632
|
HPS1-013 | protein_coding | Homo_sapiens | 0 | 682 |
|
ENST00000361490
|
HPS1-011 | protein_coding | Homo_sapiens | 0 | 1546 |
|
ENST00000465957
|
HPS1-008 | processed_transcript | Homo_sapiens | 9e-38 | 161 |
|
ENST00000467246
|
HPS1-012 | processed_transcript | Homo_sapiens | 0 | 832 |
|
ENST00000474873
|
HPS1-007 | processed_transcript | Homo_sapiens | 0 | 494 |
|
ENST00000480020
|
HPS1-002 | processed_transcript | Homo_sapiens | 0 | 339 |
|
ENST00000497527
|
HPS1-006 | processed_transcript | Homo_sapiens | 0 | 399 |
|
ENST00000498219
|
HPS1-003 | processed_transcript | Homo_sapiens | 0 | 339 |
|
ENST00000613394
|
HPS1-201 | protein_coding | Homo_sapiens | 0 | 1535 |
