C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162138 Pdcd10-002 ENSMUSG00000027835 10090 - 3:75528879-75556759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonOvaryPlacentaTestisENSMUST00000162138
Transcript ID Adrenal Brain Colon Ovary Placenta Testis
ENSMUST00000162138 0.618±0.26 9.810±0.00 1.414±0.70 4.715±5.71 15.204±0.81 4.762±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049O CIL_00049O_0003 CGP 3:75516490-75643495

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000046902 pdcd10a-201 protein_coding Danio_rerio 3e-40 169
ENSDART00000019063 pdcd10b-001 protein_coding Danio_rerio 2e-27 126
ENST00000392750 PDCD10-001 protein_coding Homo_sapiens 0 435
ENST00000461494 PDCD10-012 protein_coding Homo_sapiens 0 435
ENST00000462725 PDCD10-013 protein_coding Homo_sapiens 0 435
ENST00000464360 PDCD10-010 protein_coding Homo_sapiens 0 435
ENST00000470131 PDCD10-005 protein_coding Homo_sapiens 0 435
ENST00000471885 PDCD10-008 protein_coding Homo_sapiens 0 435
ENST00000473645 PDCD10-003 protein_coding Homo_sapiens 0 435
ENST00000475915 PDCD10-014 protein_coding Homo_sapiens 0 435
ENST00000479121 PDCD10-018 protein_coding Homo_sapiens 0 217
ENST00000481136 PDCD10-004 retained_intron Homo_sapiens 0 361
ENST00000483451 PDCD10-011 retained_intron Homo_sapiens 0 435
ENST00000487947 PDCD10-017 protein_coding Homo_sapiens 0 435
ENST00000492139 PDCD10-009 protein_coding Homo_sapiens 0 435
ENST00000494502 PDCD10-007 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000497056 PDCD10-002 protein_coding Homo_sapiens 0 435

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