C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035054-ENSDARG00000034168 CGP 7955 18:4285184-4343344
GeneTranscriptPositionBiotype
ENSDARG00000034168 (serpini1)
serpin peptidase inhibitor, clade I (neuroserpin), member 1 		ENSDART00000098299 (serpini1-201) 4334991-4343344 protein_coding
ENSDARG00000035054 (pdcd10a)
programmed cell death 10a 		ENSDART00000046902 (pdcd10a-201) 4285184-4308975 protein_coding
CIL_00049O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114209-ENSG00000163536 CGP 9606 3:167683298-167825568
GeneTranscriptPositionBiotype
ENSG00000114209 (PDCD10)
programmed cell death 10 		ENST00000392750 (PDCD10-001) 167683298-167734826 protein_coding
ENST00000461494 (PDCD10-012) 167684242-167734544 protein_coding
ENST00000462725 (PDCD10-013) 167687649-167734517 protein_coding
ENST00000462830 (PDCD10-019) 167697007-167697955 processed_transcript
ENST00000464360 (PDCD10-010) 167697040-167734832 protein_coding
ENST00000470131 (PDCD10-005) 167684256-167734892 protein_coding
ENST00000471885 (PDCD10-008) 167687222-167734851 protein_coding
ENST00000473645 (PDCD10-003) 167683910-167734939 protein_coding
ENST00000475915 (PDCD10-014) 167684339-167734510 protein_coding
ENST00000479121 (PDCD10-018) 167687223-167720098 protein_coding
ENST00000481136 (PDCD10-004) 167704558-167734929 retained_intron
ENST00000483451 (PDCD10-011) 167695596-167734821 retained_intron
ENST00000487678 (PDCD10-015) 167720205-167730976 processed_transcript
ENST00000487947 (PDCD10-017) 167687215-167734482 protein_coding
ENST00000492139 (PDCD10-009) 167687687-167734836 protein_coding
ENST00000492396 (PDCD10-016) 167684114-167725477 protein_coding
ENST00000494502 (PDCD10-007) 167695609-167734863 nonsense_mediated_decay
ENST00000497056 (PDCD10-002) 167683912-167734930 protein_coding
ENSG00000163536 (SERPINI1)
serpin peptidase inhibitor, clade I (neuroserpin), member 1 		ENST00000295777 (SERPINI1-001) 167735723-167825566 protein_coding
ENST00000446050 (SERPINI1-002) 167735430-167825568 protein_coding
ENST00000466865 (SERPINI1-013) 167807238-167825560 protein_coding
ENST00000472747 (SERPINI1-007) 167735725-167794679 protein_coding
ENST00000472941 (SERPINI1-003) 167735243-167790602 protein_coding
ENST00000488374 (SERPINI1-012) 167800046-167825562 processed_transcript
ENST00000494666 (SERPINI1-009) 167822936-167825560 retained_intron
ENSG00000241120 (HMGN1P8)
high mobility group nucleosome binding domain 1 pseudogene 8 		ENST00000463578 (HMGN1P8-001) 167694355-167694642 processed_pseudogene
CIL_00049O_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027835-ENSMUSG00000027834 CGP 10090 3:75516490-75643495
GeneTranscriptPositionBiotype
ENSMUSG00000027834 (Serpini1)
serine (or cysteine) peptidase inhibitor, clade I, member 1 		ENSMUST00000029423 (Serpini1-001) 75557547-75643495 protein_coding
ENSMUST00000161695 (Serpini1-003) 75557578-75616201 retained_intron
ENSMUST00000161776 (Serpini1-002) 75557547-75616709 protein_coding
ENSMUSG00000027835 (Pdcd10)
programmed cell death 10 		ENSMUST00000029424 (Pdcd10-006) 75517461-75556811 protein_coding
ENSMUST00000159217 (Pdcd10-005) 75533385-75556837 retained_intron
ENSMUST00000159519 (Pdcd10-004) 75517276-75521030 retained_intron
ENSMUST00000160196 (Pdcd10-003) 75517528-75521570 retained_intron
ENSMUST00000161137 (Pdcd10-001) 75516490-75556856 protein_coding
ENSMUST00000162138 (Pdcd10-002) 75528879-75556759 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049O_0001ENSDARG00000034168ENSDART00000098299ENSDARG00000035054ENSDART00000046902CIL_00049O_0002ENSG00000114209ENST00000392750ENST00000461494ENST00000462725ENST00000462830ENST00000464360ENST00000470131ENST00000471885ENST00000473645ENST00000475915ENST00000479121ENST00000481136ENST00000483451ENST00000487678ENST00000487947ENST00000492139ENST00000492396ENST00000494502ENST00000497056ENSG00000163536ENST00000295777ENST00000446050ENST00000466865ENST00000472747ENST00000472941ENST00000488374ENST00000494666ENSG00000241120ENST00000463578CIL_00049O_0003ENSMUSG00000027834ENSMUST00000029423ENSMUST00000161695ENSMUST00000161776ENSMUSG00000027835ENSMUST00000029424ENSMUST00000159217ENSMUST00000159519ENSMUST00000160196ENSMUST00000161137ENSMUST00000162138
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049O_0001ENSDARG00000034168ENSDART00000098299ENSDARG00000035054ENSDART00000046902CIL_00049O_0002ENSG00000114209ENST00000392750ENST00000461494ENST00000462725ENST00000471885ENST00000473645ENST00000475915ENST00000479121ENST00000487947ENST00000492396ENST00000497056ENSG00000163536ENST00000295777ENST00000446050ENST00000466865ENST00000472747ENST00000472941ENST00000494666ENSG00000241120ENST00000463578CIL_00049O_0003ENSMUSG00000027834ENSMUST00000029423ENSMUST00000161695ENSMUST00000161776ENSMUSG00000027835ENSMUST00000029424ENSMUST00000159217ENSMUST00000159519ENSMUST00000160196ENSMUST00000161137ENSMUST00000162138
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034168 ENSDART00000098299 N/A N/A N/A 56.959±21.25 N/A N/A 0.361±0.08 0.164±0.00 0.110±0.00 N/A 3.559±0.00 N/A N/A N/A
ENSDARG00000035054 ENSDART00000046902 N/A N/A N/A 21.337±11.09 N/A N/A 14.509±13.90 14.333±10.50 2.804±0.00 N/A 15.277±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114209 ENST00000392750 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A 2.243±0.00 N/A N/A
ENST00000461494 N/A N/A N/A N/A N/A N/A N/A 7.643±0.00 N/A N/A N/A N/A 3.748±0.00 5.782±0.00
ENST00000462725 N/A N/A N/A N/A N/A 5.337±0.00 N/A N/A N/A N/A N/A 25.078±0.00 13.234±0.00 20.973±0.00
ENST00000462830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471885 N/A N/A N/A N/A 4.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473645 N/A 2.820±0.00 1.288±0.00 N/A N/A 1.757±0.00 2.020±0.13 1.115±0.00 N/A 3.281±0.85 0.764±0.47 3.465±0.19 2.144±0.57 5.224±0.00
ENST00000475915 N/A N/A 1.598±0.00 N/A N/A 3.399±0.00 N/A N/A N/A N/A 0.915±0.00 N/A 5.925±0.00 11.953±0.00
ENST00000479121 13.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.314±0.62 N/A N/A N/A
ENST00000481136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487947 N/A N/A 1.868±0.00 5.389±0.00 4.045±0.00 N/A N/A 3.968±0.00 3.854±0.00 N/A N/A N/A 1.625±0.00 N/A
ENST00000492139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492396 N/A 6.872±0.00 N/A N/A N/A 2.985±0.00 5.200±0.00 7.429±0.00 2.095±0.00 N/A 1.460±0.00 N/A N/A 8.253±0.00
ENST00000494502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497056 N/A 6.087±0.00 2.706±0.00 6.062±0.24 5.306±1.71 5.561±0.69 3.783±0.00 3.878±1.94 3.710±2.17 10.403±0.15 N/A 9.835±0.92 5.350±2.06 11.374±0.00
ENSG00000163536 ENST00000295777 0.158±0.00 N/A 0.495±0.00 20.847±4.93 N/A N/A 0.178±0.06 N/A 0.054±0.00 0.813±0.00 N/A 0.557±0.19 0.163±0.01 0.872±0.00
ENST00000446050 0.223±0.00 1.758±0.00 0.166±0.00 25.816±3.98 2.162±0.61 0.724±0.00 0.293±0.20 0.684±0.00 0.025±0.00 N/A N/A 1.215±0.48 0.381±0.11 2.675±0.47
ENST00000466865 N/A N/A 0.823±0.00 N/A 0.967±0.00 N/A N/A 1.352±0.00 N/A N/A N/A 1.627±0.00 1.100±0.59 N/A
ENST00000472747 N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A
ENST00000472941 N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A 1.402±0.00 N/A N/A N/A
ENST00000488374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494666 N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A
ENSG00000241120 ENST00000463578 N/A 0.348±0.00 0.306±0.00 0.041±0.00 2.670±2.42 0.211±0.00 1.459±0.00 1.831±1.49 3.177±0.00 0.164±0.00 0.320±0.00 2.147±1.85 0.050±0.00 0.084±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027834 ENSMUST00000029423 0.439±0.31 0.315±0.08 0.881±0.01 21.111±2.17 0.325±0.16 0.270±0.14 0.807±0.16 0.597±0.13 0.129±0.07 0.123±0.04 0.225±0.08 0.999±0.56 0.282±0.13 0.683±0.27
ENSMUST00000161695 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A 0.897±0.25 N/A N/A
ENSMUST00000161776 3.334±2.00 0.668±0.25 1.349±0.25 N/A 1.917±0.37 1.367±0.44 4.568±2.23 4.258±1.10 0.176±0.08 0.379±0.17 0.310±0.02 13.597±2.31 0.317±0.03 4.175±0.95
ENSMUSG00000027835 ENSMUST00000029424 N/A 0.514±0.26 7.371±1.82 11.969±0.00 1.341±0.47 1.520±0.47 0.919±0.03 1.550±0.27 4.366±3.24 1.616±0.00 2.353±0.70 3.019±4.17 18.165±5.44 9.526±0.00
ENSMUST00000159217 2.942±0.00 0.473±0.00 N/A N/A N/A N/A N/A 1.056±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000159519 1.878±0.00 0.423±0.06 N/A N/A 1.149±0.20 1.912±0.41 N/A 1.567±0.31 0.898±0.00 2.998±0.30 N/A N/A N/A N/A
ENSMUST00000160196 N/A 0.423±0.00 N/A N/A N/A 1.323±0.59 N/A N/A N/A N/A N/A 0.691±0.31 N/A N/A
ENSMUST00000161137 2.516±0.56 0.269±0.01 11.961±2.47 5.101±2.49 1.262±0.30 1.584±0.49 1.626±0.29 3.036±0.58 6.018±5.27 2.755±0.53 3.022±0.76 5.200±4.61 9.106±6.10 3.167±0.91
ENSMUST00000162138 N/A 0.618±0.26 N/A 9.810±0.00 N/A 1.414±0.70 N/A N/A N/A N/A N/A 4.715±5.71 15.204±0.81 4.762±0.95

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