C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: programmed cell death 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471885 PDCD10-008 ENSG00000114209 9606 - 3:167687222-167734851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000471885
Transcript ID Breast
ENST00000471885 4.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049O CIL_00049O_0002 CGP 3:167683298-167825568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161137 Pdcd10-001 protein_coding Mus_musculus 0 979
ENSMUST00000029424 Pdcd10-006 protein_coding Mus_musculus 0 953
ENSMUST00000122112 Gm14253-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000162138 Pdcd10-002 protein_coding Mus_musculus 0 435
ENSDART00000046902 pdcd10a-201 protein_coding Danio_rerio 0 412
ENSDART00000019063 pdcd10b-001 protein_coding Danio_rerio 0 398
ENSMUST00000159217 Pdcd10-005 retained_intron Mus_musculus 0 361
ENSMUST00000160196 Pdcd10-003 retained_intron Mus_musculus 0 265
ENSMUST00000159519 Pdcd10-004 retained_intron Mus_musculus 5e-30 135

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