C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470131 PDCD10-005 ENSG00000114209 9606 - 3:167684256-167734892 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049O CIL_00049O_0002 CGP 3:167683298-167825568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0042803 IPI protein homodimerization activity
GO:0043066 IDA negative regulation of apoptotic process
GO:0043406 IDA positive regulation of MAP kinase activity
GO:0047485 IPI protein N-terminus binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161137 Pdcd10-001 protein_coding Mus_musculus 0 1197
ENSMUST00000029424 Pdcd10-006 protein_coding Mus_musculus 0 1171
ENSMUST00000122112 Gm14253-001 processed_pseudogene Mus_musculus 0 987
ENSDART00000046902 pdcd10a-201 protein_coding Danio_rerio 0 494
ENSDART00000019063 pdcd10b-001 protein_coding Danio_rerio 0 460
ENSMUST00000162138 Pdcd10-002 protein_coding Mus_musculus 0 435
ENSMUST00000160196 Pdcd10-003 retained_intron Mus_musculus 0 383
ENSMUST00000159217 Pdcd10-005 retained_intron Mus_musculus 0 361
ENSMUST00000159519 Pdcd10-004 retained_intron Mus_musculus 0 353

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