C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000162339  |
Trmu-006 |
ENSMUSG00000022386 |
10090 | + |
15:85885164-85896426  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008BF | CIL_0008BF_0002 | VISTA | 15:85812646-86415385 |
| CIL_00024F | CIL_00024F_0002 | CGP | 15:85859707-85897394 |
| CIL_00024N | CIL_00024N_0002 | CGP | 15:85879312-86033777 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000290846
|
TRMU-001 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000381019
|
TRMU-007 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000381021
|
TRMU-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000441818
|
TRMU-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000453630
|
TRMU-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000456595
|
TRMU-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000457572
|
TRMU-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 193 |
|
ENST00000485559
|
TRMU-009 | retained_intron | Homo_sapiens | 5e-25 | 121 |
|
ENST00000491612
|
TRMU-008 | retained_intron | Homo_sapiens | 0 | 193 |
