C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485559 TRMU-009 ENSG00000100416 9606 + 22:46353517-46357339 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyOvaryENST00000485559
Transcript ID Adrenal Colon Heart Kidney Ovary
ENST00000485559 2.298±0.00 0.869±0.00 0.209±0.00 1.934±0.00 2.043±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024F CIL_00024F_0001 CGP 22:46296741-46357340
CIL_00024N CIL_00024N_0001 CGP 22:46330875-46537170

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159730 Trmu-003 retained_intron Mus_musculus 0 398
ENSMUST00000162010 Trmu-002 processed_transcript Mus_musculus 0 387
ENSMUST00000023019 Trmu-001 protein_coding Mus_musculus 0 387
ENSMUST00000159362 Trmu-008 retained_intron Mus_musculus 9.99967e-42 176
ENSMUST00000162339 Trmu-006 nonsense_mediated_decay Mus_musculus 5e-25 121

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