| Transcript ID | Breast | Muscle |
|---|---|---|
| ENST00000456595 | 1.134±0.00 | 0.939±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000456595  |
TRMU-003 |
ENSG00000100416 |
9606 | + |
22:46335425-46357337  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00024F | CIL_00024F_0001 | CGP | 22:46296741-46357340 |
| CIL_00024N | CIL_00024N_0001 | CGP | 22:46330875-46537170 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004066 | IEA | asparagine synthase (glutamine-hydrolyzing) activity |
| GO:0004810 | IEA | tRNA adenylyltransferase activity |
| GO:0005737 | IEA | cytoplasm |
| GO:0006529 | IEA | asparagine biosynthetic process |
| GO:0008033 | IEA | tRNA processing |
| GO:0008168 | IEA | methyltransferase activity |
| GO:0016740 | IEA | transferase activity |
| GO:0032259 | IEA | methylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000023019
|
Trmu-001 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000162491
|
Trmu-004 | nonsense_mediated_decay | Mus_musculus | 0 | 431 |
|
ENSMUST00000162010
|
Trmu-002 | processed_transcript | Mus_musculus | 0 | 294 |
|
ENSMUST00000159362
|
Trmu-008 | retained_intron | Mus_musculus | 0 | 292 |
|
ENSMUST00000162601
|
Trmu-007 | retained_intron | Mus_musculus | 0 | 268 |
|
ENSMUST00000162339
|
Trmu-006 | nonsense_mediated_decay | Mus_musculus | 0 | 193 |
|
ENSMUST00000159730
|
Trmu-003 | retained_intron | Mus_musculus | 1.99965e-42 | 178 |
