C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vang-like 1 (van gogh, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162361 Vangl1-005 ENSMUSG00000027860 10090 - 3:102163363-102165940 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000162361
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000162361 3.682±0.00 40.779±20.03 22.373±0.00 10.756±2.18 1.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0002 VISTA 3:101762054-102363652

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310260 VANGL1-003 protein_coding Homo_sapiens 0 366
ENST00000355485 VANGL1-201 protein_coding Homo_sapiens 0 366
ENST00000369509 VANGL1-002 protein_coding Homo_sapiens 0 366
ENST00000369510 VANGL1-001 protein_coding Homo_sapiens 0 366
ENST00000474344 VANGL1-005 processed_transcript Homo_sapiens 1.99993e-41 172
ENST00000478369 VANGL1-004 processed_transcript Homo_sapiens 1.99993e-41 172

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