C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, s subcomponent 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162443 C1s1-002 ENSMUSG00000038521 10090 - 6:124530348-124542359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162443
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162443 51.675±6.23 2.096±0.26 75.341±15.88 0.088±0.05 37.390±9.33 10.928±1.98 5.319±0.44 8.502±1.29 38.678±17.18 22.607±0.42 4.409±0.85 21.698±15.46 3.977±4.74 1.677±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001H CIL_00001H_0002 CGP 6:124530345-124581171

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0006956 IEA complement activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328916 C1S-003 protein_coding Homo_sapiens 0 1613
ENST00000360817 C1S-004 protein_coding Homo_sapiens 0 1567
ENST00000402681 C1S-017 protein_coding Homo_sapiens 0 1327
ENST00000403949 C1S-007 protein_coding Homo_sapiens 0 560
ENST00000406697 C1S-001 protein_coding Homo_sapiens 0 1567
ENST00000413211 C1S-006 protein_coding Homo_sapiens 0 331
ENST00000423384 C1S-005 protein_coding Homo_sapiens 0 313
ENST00000443875 C1S-002 nonsense_mediated_decay Homo_sapiens 0 946
ENST00000461983 C1S-014 retained_intron Homo_sapiens 0 337
ENST00000495061 C1S-016 processed_transcript Homo_sapiens 0 207
ENST00000617865 C1S-201 protein_coding Homo_sapiens 0 737

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