C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E130311K13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162448 E130311K13Rik-002 ENSMUSG00000048581 10090 - 3:63924017-63929391 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000162448
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000162448 1.268±0.37 8.172±1.43 2.783±1.01 1.834±0.94 1.725±0.98 3.945±0.91 1.844±1.05 8.381±4.08 0.364±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SL CIL_0004SL_0003 CGP 3:63696234-63929472
CIL_0004SM CIL_0004SM_0003 CGP 3:63914684-63964768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340171 C3orf33-001 protein_coding Homo_sapiens 0 309
ENST00000482061 C3orf33-002 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000486435 C3orf33-003 nonsense_mediated_decay Homo_sapiens 0 241
ENST00000534941 C3orf33-201 protein_coding Homo_sapiens 0 309

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