C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD8 activating enzyme E1 subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162466 Nae1-004 ENSMUSG00000031878 10090 - 8:104511028-104534636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162466
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162466 1.170±0.55 13.523±0.00 1.031±0.14 1.801±0.00 1.916±0.54 2.125±0.90 1.802±0.00 1.759±0.00 6.505±5.41 11.551±3.16 13.340±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IV CIL_0004IV_0002 CGP 8:104446719-104534637
CIL_0003LY CIL_0003LY_0003 CGP 8:104511028-104550343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IBA nucleus
GO:0005829 IBA cytosol
GO:0019781 IBA NEDD8 activating enzyme activity
GO:0045116 IBA protein neddylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290810 NAE1-001 protein_coding Homo_sapiens 0 1917
ENST00000359087 NAE1-002 protein_coding Homo_sapiens 0 1917
ENST00000379463 NAE1-005 protein_coding Homo_sapiens 0 1914
ENST00000394074 NAE1-004 protein_coding Homo_sapiens 0 1882
ENST00000561579 NAE1-010 protein_coding Homo_sapiens 0 475
ENST00000562074 NAE1-008 retained_intron Homo_sapiens 0 274
ENST00000562428 NAE1-018 protein_coding Homo_sapiens 0 198
ENST00000562757 NAE1-016 retained_intron Homo_sapiens 0 372
ENST00000563185 NAE1-014 protein_coding Homo_sapiens 0 422
ENST00000563221 NAE1-017 retained_intron Homo_sapiens 1.99993e-41 172
ENST00000563253 NAE1-013 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000563419 NAE1-006 retained_intron Homo_sapiens 0 370
ENST00000564040 NAE1-022 processed_transcript Homo_sapiens 0 372
ENST00000565535 NAE1-021 protein_coding Homo_sapiens 0 278
ENST00000566336 NAE1-020 protein_coding Homo_sapiens 0 279
ENST00000566663 NAE1-011 protein_coding Homo_sapiens 0 464
ENST00000567521 NAE1-007 retained_intron Homo_sapiens 0 427
ENST00000567743 NAE1-003 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000568672 NAE1-009 retained_intron Homo_sapiens 0 466
ENST00000569348 NAE1-019 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000569388 NAE1-015 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000569963 NAE1-012 retained_intron Homo_sapiens 0 335

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