C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162494 Cdk8-003 ENSMUSG00000029635 10090 + 5:146231230-146302874 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162494 3.244±1.63 15.319±5.61 5.413±0.00 4.545±2.40 3.944±0.64 16.120±2.53 0.561±0.00 4.156±0.74 5.827±3.02 3.161±0.39 0.881±0.44 11.287±4.32 4.481±1.85 2.107±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MF CIL_0004MF_0002 CGP 5:146209192-146302874
CIL_0000G3 CIL_0000G3_0003 CGP 5:146231230-146472411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005634 ISO nucleus
GO:0006468 IEA protein phosphorylation
GO:0016592 ISO mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000007066 cdk8-001 protein_coding Danio_rerio 0 658
ENST00000381527 CDK8-001 protein_coding Homo_sapiens 0 2289
ENST00000415020 AC079753.5-001 processed_pseudogene Homo_sapiens 0 641
ENST00000465820 CDK8-005 processed_transcript Homo_sapiens 0 641
ENST00000477277 CDK8-002 processed_transcript Homo_sapiens 0 1840
ENST00000477290 CDK8-004 processed_transcript Homo_sapiens 0 1230
ENST00000480323 CDK8-003 processed_transcript Homo_sapiens 0 1581
ENST00000536792 CDK8-201 protein_coding Homo_sapiens 0 2004

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