C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162543 Tmem33-002 ENSMUSG00000037720 10090 + 5:67260652-67264612 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000162543
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000162543 23.746±5.03 20.071±5.42 33.402±12.48 22.059±10.52 6.190±1.17 30.826±18.06 42.759±13.15 16.127±1.28 32.691±16.71 9.002±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038I CIL_00038I_0002 CGP 5:67094405-67291461
CIL_0007OI CIL_0007OI_0002 UCNEbase 5:67098377-67633824
CIL_0007YP CIL_0007YP_0002 VISTA 5:67123705-67724669

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264452 TMEM33-002 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000325094 TMEM33-201 protein_coding Homo_sapiens 0 473
ENST00000504986 TMEM33-001 protein_coding Homo_sapiens 0 473
ENST00000506794 TMEM33-008 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000508448 TMEM33-003 protein_coding Homo_sapiens 0 473
ENST00000510383 TMEM33-005 retained_intron Homo_sapiens 0 226
ENST00000513702 TMEM33-004 protein_coding Homo_sapiens 0 497

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