C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504986 TMEM33-001 ENSG00000109133 9606 + 4:41935120-41960572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504986
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504986 2.945±0.00 1.373±0.00 5.068±1.22 1.824±0.29 1.978±0.61 1.101±0.21 3.872±0.52 3.622±1.29 2.346±1.53 1.077±0.00 2.587±1.50 2.395±1.14 0.960±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038I CIL_00038I_0001 CGP 4:41744082-41960572
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0042470 IDA melanosome
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161369 Tmem33-004 protein_coding Mus_musculus 0 1232
ENSMUST00000037918 Tmem33-001 protein_coding Mus_musculus 0 1232
ENSMUST00000160352 Tmem33-005 protein_coding Mus_musculus 0 1000
ENSMUST00000163028 Tmem33-003 retained_intron Mus_musculus 0 730
ENSMUST00000162543 Tmem33-002 protein_coding Mus_musculus 0 473
ENSMUST00000162074 Tmem33-007 nonsense_mediated_decay Mus_musculus 0.0000000000002 84
ENSMUST00000161233 Tmem33-006 protein_coding Mus_musculus 0.0000000000002 84

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