C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513702 TMEM33-004 ENSG00000109133 9606 + 4:41935129-41954395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLungPlacentaENST00000513702
Transcript ID Breast Kidney Lung Placenta
ENST00000513702 6.022±0.00 6.826±0.00 7.347±0.00 4.481±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038I CIL_00038I_0001 CGP 4:41744082-41960572
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0042470 IDA melanosome
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037918 Tmem33-001 protein_coding Mus_musculus 0 1212
ENSMUST00000161369 Tmem33-004 protein_coding Mus_musculus 0 1186
ENSMUST00000160352 Tmem33-005 protein_coding Mus_musculus 0 1013
ENSMUST00000163028 Tmem33-003 retained_intron Mus_musculus 0 730
ENSMUST00000162543 Tmem33-002 protein_coding Mus_musculus 0 497
ENSMUST00000162074 Tmem33-007 nonsense_mediated_decay Mus_musculus 3e-18 97
ENSMUST00000161233 Tmem33-006 protein_coding Mus_musculus 3e-18 97

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