C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor EB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162719 Tfeb-015 ENSMUSG00000023990 10090 + 17:47787910-47788938 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000162719
Transcript ID Breast
ENSMUST00000162719 2.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230323 TFEB-001 protein_coding Homo_sapiens 0 303
ENST00000315869 TFE3-001 protein_coding Homo_sapiens 0.000000008 68
ENST00000343317 TFEB-015 protein_coding Homo_sapiens 0 303
ENST00000358871 TFEB-010 protein_coding Homo_sapiens 0 303
ENST00000373033 TFEB-005 protein_coding Homo_sapiens 0 303
ENST00000394283 TFEB-004 protein_coding Homo_sapiens 0 303
ENST00000403298 TFEB-201 protein_coding Homo_sapiens 0 303
ENST00000406563 TFEB-003 protein_coding Homo_sapiens 0 303
ENST00000416140 TFEB-008 protein_coding Homo_sapiens 0 272
ENST00000419396 TFEB-006 protein_coding Homo_sapiens 0 303
ENST00000420312 TFEB-202 protein_coding Homo_sapiens 0 303
ENST00000487451 TFE3-006 processed_transcript Homo_sapiens 0.000000002 68
ENST00000493583 TFE3-004 nonsense_mediated_decay Homo_sapiens 0.000000008 68
ENST00000494822 TFEB-007 retained_intron Homo_sapiens 2e-31 139

Loading