C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SHQ1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162776 Shq1-003 ENSMUSG00000035378 10090 - 6:100662839-100671133 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000162776
Transcript ID Adrenal Ovary
ENSMUST00000162776 2.173±0.20 5.404±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T9 CIL_0001T9_0003 CGP 6:100228566-100671157
CIL_00059P CIL_00059P_0003 CGP 6:100573081-100805081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325599 SHQ1-001 protein_coding Homo_sapiens 0 501
ENST00000437111 RP11-50E11.2-001 processed_pseudogene Homo_sapiens 0 254
ENST00000444040 SHQ1-003 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000463369 SHQ1-004 protein_coding Homo_sapiens 0 359
ENST00000471526 SHQ1-006 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000482785 SHQ1-005 protein_coding Homo_sapiens 0 361

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