C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain, testis-specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162804 Brdt-002 ENSMUSG00000029279 10090 + 5:107359837-107386361 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000162804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000162804 0.552±0.16 0.854±0.23 0.553±0.04 1.137±0.55 1.045±0.00 0.498±0.00 0.110±0.05 0.247±0.10 0.285±0.24 0.311±0.10 0.444±0.15 0.992±0.66 0.127±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZR CIL_0005ZR_0002 CGP 5:107106570-107387058
CIL_0005ZS CIL_0005ZS_0002 CGP 5:107331159-107430035

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000362005 BRDT-001 protein_coding Homo_sapiens 0 302
ENST00000370389 BRDT-002 protein_coding Homo_sapiens 0 302
ENST00000394530 BRDT-201 protein_coding Homo_sapiens 0 302
ENST00000399546 BRDT-202 protein_coding Homo_sapiens 0 302
ENST00000402388 BRDT-006 protein_coding Homo_sapiens 0 302

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