C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ZS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137948-ENSG00000172031 CGP 9606 1:91949371-92063536
GeneTranscriptPositionBiotype
ENSG00000137948 (BRDT)
bromodomain, testis-specific 		ENST00000355011 (BRDT-008) 91949401-91962796 protein_coding
ENST00000362005 (BRDT-001) 91949371-92014421 protein_coding
ENST00000370389 (BRDT-002) 91949371-92014421 protein_coding
ENST00000394530 (BRDT-201) 91949371-92014426 protein_coding
ENST00000399546 (BRDT-202) 91949371-92014426 protein_coding
ENST00000402388 (BRDT-006) 91952162-92014421 protein_coding
ENST00000423434 (BRDT-004) 91949372-91976350 protein_coding
ENST00000426141 (BRDT-005) 91949401-91980743 protein_coding
ENST00000427104 (BRDT-012) 91949398-91976286 protein_coding
ENST00000440509 (BRDT-003) 91949384-91976421 protein_coding
ENST00000448194 (BRDT-013) 91949401-91976286 protein_coding
ENST00000449584 (BRDT-007) 91949398-91962910 protein_coding
ENST00000450792 (BRDT-016) 91949403-91964722 protein_coding
ENST00000457265 (BRDT-017) 91949434-91962849 protein_coding
ENST00000461218 (BRDT-011) 91949398-91950299 processed_transcript
ENST00000470955 (BRDT-009) 91949398-91950302 processed_transcript
ENST00000476711 (BRDT-010) 91949398-91950332 processed_transcript
ENST00000484781 (BRDT-018) 91977081-91979603 processed_transcript
ENST00000484833 (BRDT-015) 91949403-91950312 processed_transcript
ENST00000548992 (BRDT-019) 91949403-91964735 protein_coding
ENST00000552654 (BRDT-020) 91949403-91968224 protein_coding
ENSG00000172031 (EPHX4)
epoxide hydrolase 4 		ENST00000370383 (EPHX4-001) 92029982-92063536 protein_coding
ENST00000480758 (EPHX4-002) 92032561-92043794 processed_transcript
CIL_0005ZS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029279-ENSMUSG00000033805 CGP 10090 5:107331159-107430035
GeneTranscriptPositionBiotype
ENSMUSG00000029279 (Brdt)
bromodomain, testis-specific 		ENSMUST00000031215 (Brdt-001) 107331159-107387058 protein_coding
ENSMUST00000112677 (Brdt-003) 107331175-107350741 protein_coding
ENSMUST00000161377 (Brdt-004) 107331192-107342075 processed_transcript
ENSMUST00000162804 (Brdt-002) 107359837-107386361 processed_transcript
ENSMUSG00000033805 (Ephx4)
epoxide hydrolase 4 		ENSMUST00000049146 (Ephx4-001) 107403496-107430035 protein_coding
ENSMUST00000159968 (Ephx4-002) 107402736-107413620 protein_coding
ENSMUST00000161246 (Ephx4-003) 107403775-107413528 protein_coding
ENSMUST00000161452 (Ephx4-004) 107405785-107413588 protein_coding
ENSMUSG00000064554 (n-R5s173)
nuclear encoded rRNA 5S 173 		ENSMUST00000082620 (n-R5s173-201) 107401319-107401437 rRNA
ENSMUSG00000081798 (Gm8152)
predicted gene 8152 		ENSMUST00000120842 (Gm8152-001) 107381381-107382017 processed_pseudogene
ENSMUSG00000090558 (Gm17202)
predicted gene 17202 		ENSMUST00000171723 (Gm17202-001) 107404823-107431910 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZS_0001ENSG00000137948ENST00000355011ENST00000362005ENST00000370389ENST00000394530ENST00000399546ENST00000402388ENST00000423434ENST00000426141ENST00000427104ENST00000440509ENST00000448194ENST00000449584ENST00000450792ENST00000457265ENST00000461218ENST00000470955ENST00000476711ENST00000484781ENST00000484833ENST00000548992ENST00000552654ENSG00000172031ENST00000370383ENST00000480758CIL_0005ZS_0002ENSMUSG00000029279ENSMUST00000031215ENSMUST00000112677ENSMUST00000161377ENSMUST00000162804ENSMUSG00000033805ENSMUST00000049146ENSMUST00000159968ENSMUST00000161246ENSMUST00000161452ENSMUSG00000064554ENSMUST00000082620ENSMUSG00000081798ENSMUST00000120842ENSMUSG00000090558ENSMUST00000171723
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZS_0001ENSG00000137948ENST00000355011ENST00000370389ENST00000394530ENST00000402388ENST00000426141ENST00000449584ENST00000450792ENST00000457265ENST00000484781ENST00000552654ENSG00000172031ENST00000370383ENST00000480758CIL_0005ZS_0002ENSMUSG00000029279ENSMUST00000031215ENSMUST00000112677ENSMUST00000162804ENSMUSG00000033805ENSMUST00000049146ENSMUST00000159968ENSMUST00000161246ENSMUST00000161452ENSMUSG00000064554ENSMUST00000082620ENSMUSG00000081798ENSMUST00000120842ENSMUSG00000090558ENSMUST00000171723
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137948 ENST00000355011 N/A 0.159±0.00 N/A 0.234±0.00 0.125±0.00 0.152±0.00 0.117±0.00 0.294±0.00 0.037±0.00 N/A 0.036±0.00 0.043±0.00 N/A N/A
ENST00000362005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.347±0.00
ENST00000394530 N/A 0.020±0.00 N/A 0.048±0.00 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 21.722±0.00
ENST00000399546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402388 0.025±0.00 N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 19.201±0.00
ENST00000423434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426141 N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449584 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.067±0.00 N/A N/A
ENST00000450792 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A
ENST00000457265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.02 N/A N/A
ENST00000461218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484781 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A
ENSG00000172031 ENST00000370383 0.449±0.00 0.281±0.00 N/A 5.228±0.69 0.329±0.00 0.373±0.00 0.085±0.00 0.279±0.00 N/A 0.094±0.00 0.103±0.00 0.996±0.67 0.536±0.14 0.903±0.12
ENST00000480758 N/A 0.131±0.00 N/A N/A 0.072±0.00 N/A 0.030±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029279 ENSMUST00000031215 0.360±0.15 1.195±0.74 N/A 0.891±0.67 0.476±0.29 0.700±0.25 0.087±0.02 0.173±0.08 0.098±0.09 0.517±0.00 0.159±0.02 1.139±0.77 0.115±0.08 11.727±3.45
ENSMUST00000112677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 47.356±7.53
ENSMUST00000161377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162804 0.552±0.16 0.854±0.23 0.553±0.04 1.137±0.55 1.045±0.00 0.498±0.00 0.110±0.05 0.247±0.10 0.285±0.24 0.311±0.10 0.444±0.15 0.992±0.66 0.127±0.05 N/A
ENSMUSG00000033805 ENSMUST00000049146 0.962±0.62 0.974±0.19 0.144±0.00 4.316±5.15 0.505±0.23 10.170±0.48 0.066±0.03 0.086±0.02 0.035±0.01 1.130±0.22 0.211±0.07 1.596±0.61 0.182±0.10 N/A
ENSMUST00000159968 N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A 0.244±0.00 N/A N/A N/A
ENSMUST00000161246 N/A N/A N/A N/A N/A N/A 0.111±0.01 N/A N/A N/A 0.260±0.00 N/A 0.844±0.00 N/A
ENSMUST00000161452 N/A N/A N/A 67.750±0.00 0.709±0.00 N/A 0.180±0.06 N/A 0.073±0.02 N/A N/A 2.487±0.00 0.312±0.00 N/A
ENSMUSG00000064554 ENSMUST00000082620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.648±0.00 40.599±3.27 N/A
ENSMUSG00000081798 ENSMUST00000120842 0.489±0.14 0.643±0.00 N/A 0.378±0.13 0.495±0.24 0.264±0.17 0.113±0.05 0.255±0.13 0.183±0.20 0.499±0.02 0.084±0.00 1.780±1.61 0.038±0.00 0.585±0.09
ENSMUSG00000090558 ENSMUST00000171723 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 0.028±0.00 N/A N/A N/A 0.012±0.00 N/A

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