C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ZS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137948-ENSG00000172031 CGP 9606 1:91949371-92063536
GeneTranscriptPositionBiotype
ENSG00000137948 (BRDT)
bromodomain, testis-specific 		ENST00000355011 (BRDT-008) 91949401-91962796 protein_coding
ENST00000362005 (BRDT-001) 91949371-92014421 protein_coding
ENST00000370389 (BRDT-002) 91949371-92014421 protein_coding
ENST00000394530 (BRDT-201) 91949371-92014426 protein_coding
ENST00000399546 (BRDT-202) 91949371-92014426 protein_coding
ENST00000402388 (BRDT-006) 91952162-92014421 protein_coding
ENST00000423434 (BRDT-004) 91949372-91976350 protein_coding
ENST00000426141 (BRDT-005) 91949401-91980743 protein_coding
ENST00000427104 (BRDT-012) 91949398-91976286 protein_coding
ENST00000440509 (BRDT-003) 91949384-91976421 protein_coding
ENST00000448194 (BRDT-013) 91949401-91976286 protein_coding
ENST00000449584 (BRDT-007) 91949398-91962910 protein_coding
ENST00000450792 (BRDT-016) 91949403-91964722 protein_coding
ENST00000457265 (BRDT-017) 91949434-91962849 protein_coding
ENST00000461218 (BRDT-011) 91949398-91950299 processed_transcript
ENST00000470955 (BRDT-009) 91949398-91950302 processed_transcript
ENST00000476711 (BRDT-010) 91949398-91950332 processed_transcript
ENST00000484781 (BRDT-018) 91977081-91979603 processed_transcript
ENST00000484833 (BRDT-015) 91949403-91950312 processed_transcript
ENST00000548992 (BRDT-019) 91949403-91964735 protein_coding
ENST00000552654 (BRDT-020) 91949403-91968224 protein_coding
ENSG00000172031 (EPHX4)
epoxide hydrolase 4 		ENST00000370383 (EPHX4-001) 92029982-92063536 protein_coding
ENST00000480758 (EPHX4-002) 92032561-92043794 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005ZS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029279-ENSMUSG00000033805 CGP 10090 5:107331159-107430035
GeneTranscriptPositionBiotype
ENSMUSG00000029279 (Brdt)
bromodomain, testis-specific 		ENSMUST00000031215 (Brdt-001) 107331159-107387058 protein_coding
ENSMUST00000112677 (Brdt-003) 107331175-107350741 protein_coding
ENSMUST00000161377 (Brdt-004) 107331192-107342075 processed_transcript
ENSMUST00000162804 (Brdt-002) 107359837-107386361 processed_transcript
ENSMUSG00000033805 (Ephx4)
epoxide hydrolase 4 		ENSMUST00000049146 (Ephx4-001) 107403496-107430035 protein_coding
ENSMUST00000159968 (Ephx4-002) 107402736-107413620 protein_coding
ENSMUST00000161246 (Ephx4-003) 107403775-107413528 protein_coding
ENSMUST00000161452 (Ephx4-004) 107405785-107413588 protein_coding
ENSMUSG00000064554 (n-R5s173)
nuclear encoded rRNA 5S 173 		ENSMUST00000082620 (n-R5s173-201) 107401319-107401437 rRNA
ENSMUSG00000081798 (Gm8152)
predicted gene 8152 		ENSMUST00000120842 (Gm8152-001) 107381381-107382017 processed_pseudogene
ENSMUSG00000090558 (Gm17202)
predicted gene 17202 		ENSMUST00000171723 (Gm17202-001) 107404823-107431910 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZS_0001ENSG00000137948ENST00000355011ENST00000362005ENST00000370389ENST00000394530ENST00000399546ENST00000402388ENST00000423434ENST00000426141ENST00000427104ENST00000440509ENST00000448194ENST00000449584ENST00000450792ENST00000457265ENST00000461218ENST00000470955ENST00000476711ENST00000484781ENST00000484833ENST00000548992ENST00000552654ENSG00000172031ENST00000370383ENST00000480758CIL_0005ZS_0002ENSMUSG00000029279ENSMUST00000031215ENSMUST00000112677ENSMUST00000161377ENSMUST00000162804ENSMUSG00000033805ENSMUST00000049146ENSMUST00000159968ENSMUST00000161246ENSMUST00000161452ENSMUSG00000064554ENSMUST00000082620ENSMUSG00000081798ENSMUST00000120842ENSMUSG00000090558ENSMUST00000171723
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZS_0001ENSG00000137948ENST00000355011ENST00000370389ENST00000394530ENST00000402388ENST00000426141ENST00000449584ENST00000450792ENST00000457265ENST00000484781ENST00000552654ENSG00000172031ENST00000370383ENST00000480758CIL_0005ZS_0002ENSMUSG00000029279ENSMUST00000031215ENSMUST00000112677ENSMUST00000162804ENSMUSG00000033805ENSMUST00000049146ENSMUST00000159968ENSMUST00000161246ENSMUST00000161452ENSMUSG00000064554ENSMUST00000082620ENSMUSG00000081798ENSMUST00000120842ENSMUSG00000090558ENSMUST00000171723
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137948 ENST00000355011 N/A 0.159±0.00 N/A 0.234±0.00 0.125±0.00 0.152±0.00 0.117±0.00 0.294±0.00 0.037±0.00 N/A 0.036±0.00 0.043±0.00 N/A N/A
ENST00000362005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.347±0.00
ENST00000394530 N/A 0.020±0.00 N/A 0.048±0.00 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 21.722±0.00
ENST00000399546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402388 0.025±0.00 N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 19.201±0.00
ENST00000423434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426141 N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449584 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.067±0.00 N/A N/A
ENST00000450792 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A
ENST00000457265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.02 N/A N/A
ENST00000461218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484781 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A
ENSG00000172031 ENST00000370383 0.449±0.00 0.281±0.00 N/A 5.228±0.69 0.329±0.00 0.373±0.00 0.085±0.00 0.279±0.00 N/A 0.094±0.00 0.103±0.00 0.996±0.67 0.536±0.14 0.903±0.12
ENST00000480758 N/A 0.131±0.00 N/A N/A 0.072±0.00 N/A 0.030±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029279 ENSMUST00000031215 0.360±0.15 1.195±0.74 N/A 0.891±0.67 0.476±0.29 0.700±0.25 0.087±0.02 0.173±0.08 0.098±0.09 0.517±0.00 0.159±0.02 1.139±0.77 0.115±0.08 11.727±3.45
ENSMUST00000112677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 47.356±7.53
ENSMUST00000161377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162804 0.552±0.16 0.854±0.23 0.553±0.04 1.137±0.55 1.045±0.00 0.498±0.00 0.110±0.05 0.247±0.10 0.285±0.24 0.311±0.10 0.444±0.15 0.992±0.66 0.127±0.05 N/A
ENSMUSG00000033805 ENSMUST00000049146 0.962±0.62 0.974±0.19 0.144±0.00 4.316±5.15 0.505±0.23 10.170±0.48 0.066±0.03 0.086±0.02 0.035±0.01 1.130±0.22 0.211±0.07 1.596±0.61 0.182±0.10 N/A
ENSMUST00000159968 N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A 0.244±0.00 N/A N/A N/A
ENSMUST00000161246 N/A N/A N/A N/A N/A N/A 0.111±0.01 N/A N/A N/A 0.260±0.00 N/A 0.844±0.00 N/A
ENSMUST00000161452 N/A N/A N/A 67.750±0.00 0.709±0.00 N/A 0.180±0.06 N/A 0.073±0.02 N/A N/A 2.487±0.00 0.312±0.00 N/A
ENSMUSG00000064554 ENSMUST00000082620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.648±0.00 40.599±3.27 N/A
ENSMUSG00000081798 ENSMUST00000120842 0.489±0.14 0.643±0.00 N/A 0.378±0.13 0.495±0.24 0.264±0.17 0.113±0.05 0.255±0.13 0.183±0.20 0.499±0.02 0.084±0.00 1.780±1.61 0.038±0.00 0.585±0.09
ENSMUSG00000090558 ENSMUST00000171723 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 0.028±0.00 N/A N/A N/A 0.012±0.00 N/A

Loading