C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163028 Tmem33-003 ENSMUSG00000037720 10090 + 5:67260897-67269006 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000163028
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000163028 23.151±2.30 22.743±0.00 23.177±2.48 19.620±4.09 9.467±1.87 25.037±3.57 17.913±4.05 15.974±0.72 47.300±8.70 7.372±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038I CIL_00038I_0002 CGP 5:67094405-67291461
CIL_0007OI CIL_0007OI_0002 UCNEbase 5:67098377-67633824
CIL_0007YP CIL_0007YP_0002 VISTA 5:67123705-67724669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264452 TMEM33-002 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000325094 TMEM33-201 protein_coding Homo_sapiens 0 730
ENST00000504986 TMEM33-001 protein_coding Homo_sapiens 0 730
ENST00000506794 TMEM33-008 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000508448 TMEM33-003 protein_coding Homo_sapiens 0 730
ENST00000510383 TMEM33-005 retained_intron Homo_sapiens 0 226
ENST00000513702 TMEM33-004 protein_coding Homo_sapiens 0 730

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