C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17053
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163501 Gm17053-001 ENSMUSG00000091887 10090 - 12:106544837-106546326 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JE CIL_0007JE_0002 UCNEbase 12:105838681-106687937
CIL_0008VD CIL_0008VD_0002 VISTA 12:106077315-106678522
CIL_0008VE CIL_0008VE_0002 VISTA 12:106179344-106780241

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304921 RPS7-001 protein_coding Homo_sapiens 0 303
ENST00000403564 RPS7-008 protein_coding Homo_sapiens 0 303
ENST00000406376 RPS7-009 protein_coding Homo_sapiens 0 303
ENST00000407445 RPS7-005 protein_coding Homo_sapiens 0 239
ENST00000418311 RPS7P8-001 processed_pseudogene Homo_sapiens 0 270
ENST00000426405 RPS7P14-001 processed_pseudogene Homo_sapiens 0 252
ENST00000444127 RPS7P4-001 processed_pseudogene Homo_sapiens 0 276
ENST00000462576 RPS7-006 retained_intron Homo_sapiens 0 303
ENST00000464254 RPS7P10-001 processed_pseudogene Homo_sapiens 0 292
ENST00000472966 RPS7-004 retained_intron Homo_sapiens 0 204
ENST00000481006 RPS7-002 retained_intron Homo_sapiens 3e-30 139
ENST00000491937 RPS7-007 retained_intron Homo_sapiens 0 239

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