C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407445 RPS7-005 ENSG00000171863 9606 + 2:3575322-3580539 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryENST00000407445
Transcript ID Colon Ovary
ENST00000407445 13.127±0.00 14.097±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074267 Rps7-201 protein_coding Mus_musculus 0 662
ENSMUST00000178147 Gm6472-002 processed_transcript Mus_musculus 0 645
ENSMUST00000187973 Gm6472-001 transcribed_processed_pseudogene Mus_musculus 0 636
ENSMUST00000104916 Gm9493-201 protein_coding Mus_musculus 0 616
ENSMUST00000190473 RP23-300D5.1-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000119317 Gm8019-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000116438 Gm7091-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000178086 Gm4761-201 processed_pseudogene Mus_musculus 0 503
ENSMUST00000121100 Gm5135-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000163501 Gm17053-001 processed_pseudogene Mus_musculus 0 239

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