C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin T1, skeletal, slow
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163538 Tnnt1-010 ENSMUSG00000064179 10090 - 7:4508578-4514574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryTestisENSMUST00000163538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENSMUST00000163538 0.119±0.01 0.313±0.21 0.579±0.00 37.323±0.00 0.248±0.18 0.245±0.05 1.014±0.04 0.827±0.00 0.386±0.00 1.987±3.07 0.148±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RJ CIL_0003RJ_0002 CGP 7:4481520-4516382
CIL_00065K CIL_00065K_0002 CGP 7:4504570-4524229

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236918 TNNT2-201 protein_coding Homo_sapiens 2e-30 137
ENST00000367315 TNNT2-203 protein_coding Homo_sapiens 2e-30 137
ENST00000367317 TNNT2-204 protein_coding Homo_sapiens 2e-30 137
ENST00000367318 TNNT2-005 protein_coding Homo_sapiens 2e-30 137
ENST00000367322 TNNT2-001 protein_coding Homo_sapiens 2e-30 137
ENST00000412633 TNNT2-012 protein_coding Homo_sapiens 0.00000000002 73
ENST00000421663 TNNT2-205 protein_coding Homo_sapiens 2e-30 137
ENST00000422165 TNNT2-014 protein_coding Homo_sapiens 0.00000000000003 82
ENST00000438742 TNNT2-002 protein_coding Homo_sapiens 1e-30 137
ENST00000455702 TNNT2-010 protein_coding Homo_sapiens 6e-28 128
ENST00000458432 TNNT2-206 protein_coding Homo_sapiens 2e-30 137
ENST00000466570 TNNT2-006 processed_transcript Homo_sapiens 8e-28 128
ENST00000491504 TNNT2-004 retained_intron Homo_sapiens 4e-30 137
ENST00000503459 TNNT2-022 retained_intron Homo_sapiens 7e-28 128
ENST00000509001 TNNT2-008 protein_coding Homo_sapiens 2e-30 137
ENST00000515042 TNNT2-019 retained_intron Homo_sapiens 2e-30 137

Loading