C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sushi, nidogen and EGF-like domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163688 Sned1-004 ENSMUSG00000047793 10090 + 1:93281237-93295787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartOvaryENSMUST00000163688
Transcript ID Adrenal Heart Ovary
ENSMUST00000163688 4.934±0.00 3.532±0.00 10.706±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UE CIL_0004UE_0003 CGP 1:93194049-93301065
CIL_0004GT CIL_0004GT_0002 CGP 1:93235841-93305915

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310397 SNED1-001 protein_coding Homo_sapiens 0 1338
ENST00000342631 SNED1-201 protein_coding Homo_sapiens 0 1565
ENST00000401884 SNED1-005 protein_coding Homo_sapiens 0 1338
ENST00000405547 SNED1-004 protein_coding Homo_sapiens 0 1515
ENST00000466618 SNED1-003 retained_intron Homo_sapiens 0 1565

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