C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sushi, nidogen and EGF-like domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401884 SNED1-005 ENSG00000162804 9606 + 2:240998838-241073986 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UE CIL_0004UE_0002 CGP 2:240906330-241095568
CIL_0004GT CIL_0004GT_0001 CGP 2:240998838-241102332

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007160 IEA cell-matrix adhesion
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062202 Sned1-001 protein_coding Mus_musculus 0 3855
ENSMUST00000172289 Sned1-002 retained_intron Mus_musculus 0 3269
ENSMUST00000163688 Sned1-004 protein_coding Mus_musculus 0 1338

Loading