C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583051 RP11-552O4.2-001 ENSG00000266184 9606 - 18:26831520-26832432 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleTestisENST00000583051
Transcript ID Brain Kidney Muscle Testis
ENST00000583051 0.223±0.00 0.037±0.00 0.123±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EQ CIL_0006EQ_0001 CGP 18:26454910-26865818

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005394 Ufd1l-201 protein_coding Mus_musculus 0 922
ENSMUST00000115578 Ufd1l-001 protein_coding Mus_musculus 0 922
ENSMUST00000172013 Ufd1l-002 nonsense_mediated_decay Mus_musculus 0 741
ENSMUST00000163695 Ufd1l-003 nonsense_mediated_decay Mus_musculus 0 220
ENSMUST00000170325 Ufd1l-007 retained_intron Mus_musculus 0 195

Loading