C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TPX2, microtubule-associated protein homolog (Xenopus laevis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164120 Tpx2-201 ENSMUSG00000027469 10090 + 2:152847964-152895321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000164120
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000164120 0.114±0.00 0.359±0.00 2.823±1.38 0.469±0.00 0.574±0.08 0.098±0.05 5.007±1.73 0.230±0.07 0.805±0.44 2.975±1.60 1.060±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A2 CIL_0001A2_0002 CGP 2:152780668-152895321
CIL_000319 CIL_000319_0003 CGP 2:152847964-152923068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005819 IDA spindle
GO:0005874 IEA microtubule
GO:0006915 IEA apoptotic process
GO:0007067 IEA mitotic nuclear division
GO:0015630 IEA microtubule cytoskeleton
GO:0019901 IPI protein kinase binding
GO:0032147 ISS activation of protein kinase activity
GO:0043203 IDA axon hillock
GO:0060236 IMP regulation of mitotic spindle organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300403 TPX2-001 protein_coding Homo_sapiens 0 1951
ENST00000340513 TPX2-002 protein_coding Homo_sapiens 0 1232

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