C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutated in colorectal cancers
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164666 Mcc-202 ENSMUSG00000071856 10090 - 18:44425061-44662266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164666
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164666 3.513±1.88 1.540±0.00 1.515±0.36 1.026±0.61 0.623±0.08 3.321±0.71 1.493±0.97 1.505±0.00 4.048±0.26 0.520±0.15 1.591±0.96 0.699±0.35 0.204±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UM CIL_0004UM_0002 CGP 18:44380500-44812182

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302475 MCC-001 protein_coding Homo_sapiens 0 3193
ENST00000408903 MCC-003 protein_coding Homo_sapiens 0 2950
ENST00000502648 MCC-004 retained_intron Homo_sapiens 0 606
ENST00000506605 MCC-007 processed_transcript Homo_sapiens 0 905
ENST00000511847 MCC-006 processed_transcript Homo_sapiens 0 905
ENST00000514701 MCC-009 protein_coding Homo_sapiens 0 2760
ENST00000515367 MCC-011 protein_coding Homo_sapiens 0 2959
ENST00000624689 MCC-012 protein_coding Homo_sapiens 0 652

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