C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4782
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164674 Gm4782-201 ENSMUSG00000092012 10090 + 6:50608637-50610709 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaENSMUST00000164674
Transcript ID Bladder Brain Liver Ovary Placenta
ENSMUST00000164674 0.008±0.00 0.038±0.03 0.004±0.00 0.049±0.00 0.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099B CIL_00099B_0002 VISTA 6:50510700-51111821
CIL_00094X CIL_00094X_0002 VISTA 6:50521119-51123589
CIL_0009C1 CIL_0009C1_0002 VISTA 6:50589578-51192588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377327 CRNKL1-001 protein_coding Homo_sapiens 0 2008
ENST00000377340 CRNKL1-002 protein_coding Homo_sapiens 0 2008
ENST00000490910 CRNKL1-003 nonsense_mediated_decay Homo_sapiens 0 1982
ENST00000496549 CRNKL1-004 nonsense_mediated_decay Homo_sapiens 0 1978
ENST00000536226 CRNKL1-007 protein_coding Homo_sapiens 0 2008

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