C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164833 Hnrnpd-012 ENSMUSG00000000568 10090 - 5:99961168-99964750 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaTestisENSMUST00000164833
Transcript ID Kidney Liver Ovary Placenta Testis
ENSMUST00000164833 5.385±0.00 3.807±0.00 29.869±0.00 54.158±0.00 34.892±28.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0043488 IMP regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313899 HNRNPD-001 protein_coding Homo_sapiens 0 704
ENST00000352301 HNRNPD-003 protein_coding Homo_sapiens 0 704
ENST00000353341 HNRNPD-002 protein_coding Homo_sapiens 0 292
ENST00000508119 HNRNPD-012 processed_transcript Homo_sapiens 0 274
ENST00000509263 HNRNPD-011 protein_coding Homo_sapiens 0 508
ENST00000513584 HNRNPD-004 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000514325 HNRNPD-006 retained_intron Homo_sapiens 0 292
ENST00000514671 HNRNPD-005 nonsense_mediated_decay Homo_sapiens 0 654

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