| Transcript ID | Bladder | Brain | Lung |
|---|---|---|---|
| ENST00000357730 | 0.242±0.00 | 8.718±0.00 | 0.764±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000357730  |
SLC6A9-002 |
ENSG00000196517 |
9606 | - |
1:43997528-44017325  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B8 | CIL_0009B8_0001 | VISTA | 1:43734711-44337665 |
| CIL_0008SF | CIL_0008SF_0001 | VISTA | 1:43949748-44550457 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003333 | IEA | amino acid transmembrane transport |
| GO:0005283 | IEA | sodium:amino acid symporter activity |
| GO:0005328 | IEA | neurotransmitter:sodium symporter activity |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | IEA | integral component of plasma membrane |
| GO:0006810 | TAS | transport |
| GO:0006836 | IEA | neurotransmitter transport |
| GO:0015375 | TAS | glycine:sodium symporter activity |
| GO:0016020 | TAS | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0055085 | TAS | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030269
|
Slc6a9-001 | protein_coding | Mus_musculus | 0 | 2499 |
|
ENSMUST00000063857
|
Slc6a9-003 | protein_coding | Mus_musculus | 0 | 2499 |
|
ENSMUST00000163288
|
Slc6a9-010 | protein_coding | Mus_musculus | 0 | 2226 |
|
ENSMUST00000169885
|
Slc6a9-009 | protein_coding | Mus_musculus | 0 | 2021 |
|
ENSMUST00000132043
|
Slc6a9-006 | protein_coding | Mus_musculus | 0 | 1644 |
|
ENSMUST00000169990
|
Slc6a9-013 | protein_coding | Mus_musculus | 0 | 1312 |
|
ENSMUST00000149168
|
Slc6a9-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1303 |
|
ENSMUST00000123994
|
Slc6a9-011 | protein_coding | Mus_musculus | 0 | 510 |
|
ENSMUST00000136476
|
Slc6a9-008 | processed_transcript | Mus_musculus | 0 | 486 |
|
ENSMUST00000164853
|
Ccdc24-006 | protein_coding | Mus_musculus | 0 | 285 |
|
ENSMUST00000135769
|
Slc6a9-007 | processed_transcript | Mus_musculus | 0 | 268 |
|
ENSMUST00000163974
|
Ccdc24-009 | processed_transcript | Mus_musculus | 0 | 195 |
