C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506083 CTC-250P20.2-001 ENSG00000251467 9606 + 5:72996920-72997642 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000506083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000506083 0.046±0.00 0.024±0.00 0.728±0.00 0.076±0.00 1.093±0.00 0.061±0.01 0.158±0.11 0.322±0.00 0.104±0.00 0.382±0.24 0.186±0.00 0.099±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KX CIL_0007KX_0001 UCNEbase 5:72908703-73338640

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108593 Ctdnep1-001 protein_coding Mus_musculus 0 856
ENSMUST00000165001 Gm6872-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000141623 Ctdnep1-005 protein_coding Mus_musculus 0 651
ENSMUST00000131531 Ctdnep1-002 retained_intron Mus_musculus 0 590
ENSMUST00000138246 Ctdnep1-004 retained_intron Mus_musculus 0 196
ENSMUST00000152226 Ctdnep1-003 processed_transcript Mus_musculus 0 193

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