C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570760 CTD-2545G14.7-001 ENSG00000262526 9606 - 17:7240427-7244635 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000570760
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000570760 180.696±0.00 198.018±0.00 340.837±0.00 356.789±0.00 305.473±0.00 108.685±0.00 286.919±0.00 68.192±45.11 167.256±148.87 147.530±0.00 361.705±6.77 370.230±0.00 521.010±16.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018711 Gabarap-001 protein_coding Mus_musculus 0 756
ENSMUST00000144443 Gabarap-002 retained_intron Mus_musculus 0 630
ENSMUST00000108592 Gabarap-004 protein_coding Mus_musculus 0 479
ENSMUST00000139007 Gabarap-003 processed_transcript Mus_musculus 3e-37 159
ENSMUST00000152226 Ctdnep1-003 processed_transcript Mus_musculus 2e-34 150
ENSMUST00000138246 Ctdnep1-004 retained_intron Mus_musculus 2e-34 150
ENSMUST00000108593 Ctdnep1-001 protein_coding Mus_musculus 2e-34 150
ENSMUST00000165001 Gm6872-001 processed_pseudogene Mus_musculus 2e-29 134
ENSMUST00000141623 Ctdnep1-005 protein_coding Mus_musculus 2e-29 134
ENSMUST00000131531 Ctdnep1-002 retained_intron Mus_musculus 2e-23 113

Loading