C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165123 Csnk1a1-001 ENSMUSG00000024576 10090 + 18:61555274-61590061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165123 27.515±8.25 14.878±5.09 44.211±3.46 48.350±4.38 19.968±2.67 19.555±1.76 19.235±2.97 16.131±1.76 18.612±7.79 27.103±3.25 33.052±3.97 20.467±7.18 32.301±5.64 8.041±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000902 IGI cell morphogenesis
GO:0004672 IDA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005847 ISS mRNA cleavage and polyadenylation specificity factor complex
GO:0005856 IEA cytoskeleton
GO:0006468 IDA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0016055 IEA Wnt signaling pathway
GO:0016607 ISS nuclear speck
GO:0030529 IDA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261798 CSNK1A1-001 protein_coding Homo_sapiens 0 3042
ENST00000377843 CSNK1A1-201 protein_coding Homo_sapiens 0 1821
ENST00000379800 CSNK1A1L-001 protein_coding Homo_sapiens 0 1330
ENST00000412431 CSNK1A1-202 protein_coding Homo_sapiens 0 1092
ENST00000430593 CSNK1A1P1-002 processed_transcript Homo_sapiens 0 401
ENST00000503350 CSNK1A1-006 protein_coding Homo_sapiens 0 739
ENST00000504105 CSNK1A1P3-001 processed_pseudogene Homo_sapiens 0 250
ENST00000504676 CSNK1A1-002 protein_coding Homo_sapiens 0 2470
ENST00000515435 CSNK1A1-004 protein_coding Homo_sapiens 0 1943
ENST00000515748 CSNK1A1-005 protein_coding Homo_sapiens 0 396
ENST00000515768 CSNK1A1-003 protein_coding Homo_sapiens 0 839
ENST00000523203 CSNK1A1-007 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000546014 AP000619.6-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000563423 CSNK1A1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 1085
ENST00000606299 CSNK1A1-009 protein_coding Homo_sapiens 0 473
ENST00000606719 CSNK1A1-008 protein_coding Homo_sapiens 0 841
ENST00000606826 CSNK1A1-010 nonsense_mediated_decay Homo_sapiens 0 671

Loading