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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | coiled-coil domain containing 62 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000165148  |
Ccdc62-201 |
ENSMUSG00000061882 |
10090 | + |
5:123930689-123969895  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00084E | CIL_00084E_0002 | VISTA | 5:123871507-124476501 |
| CIL_0002PG | CIL_0002PG_0002 | CGP | 5:123876736-123928832 |
| CIL_0002P9 | CIL_0002P9_0002 | CGP | 5:123907175-123969895 |
| CIL_0001EI | CIL_0001EI_0002 | CGP | 5:123927418-124003211 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0005886 | IEA | plasma membrane |
| GO:0030331 | IEA | estrogen receptor binding |
| GO:0030374 | IEA | ligand-dependent nuclear receptor transcription coactivator activity |
| GO:0045944 | IEA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0071392 | IEA | cellular response to estradiol stimulus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000253079
|
CCDC62-001 | protein_coding | Homo_sapiens | 0 | 1373 |
|
ENST00000341952
|
CCDC62-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1373 |
|
ENST00000392440
|
CCDC62-201 | protein_coding | Homo_sapiens | 0 | 893 |
|
ENST00000392441
|
CCDC62-005 | protein_coding | Homo_sapiens | 0 | 1373 |
