C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17213
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165161 Gm17213-001 ENSMUSG00000090743 10090 - 3:69431009-69432368 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000165161
Transcript ID Adipose Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000165161 0.062±0.03 0.196±0.04 0.037±0.01 0.094±0.00 0.105±0.07 0.046±0.01 0.065±0.07 0.020±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K2 CIL_0004K2_0003 CGP 3:69222419-69560802
CIL_0001Z8 CIL_0001Z8_0002 CGP 3:69316861-69598861

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349511 UBA3-002 protein_coding Homo_sapiens 0 808
ENST00000361055 UBA3-001 protein_coding Homo_sapiens 0 850
ENST00000415609 UBA3-006 protein_coding Homo_sapiens 0 691
ENST00000461934 UBA3-007 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000465627 UBA3-010 nonsense_mediated_decay Homo_sapiens 0 555

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